Skip to content

search   cart   my account   contact


Catch sticky candidates before PK fails.

Off-target plasma binding sinks bioavailability and drives fast clearance, and it rarely surfaces before the first in vivo PK study. MACS® Matchmaker profiles your candidate panel directly in undiluted human plasma, with full kinetics and within-chip replicates from a single chip in approximately one hour.

Up to 64
Candidates per chip
~1 hour
Plasma SCK run
100%
Undiluted human plasma
DDI
Pre-conjugated panel
Scientific Background

Plasma stickiness is the late-stage failure mode that current discovery screens miss.

Why plasma binding drives clinical attrition

Off-target plasma binding sequesters dose, accelerates clearance, and inflates required dosing. Serum proteins outnumber the drug target by orders of magnitude in human plasma, so even sub-micromolar affinity for abundant carriers (HSA, α1-acid glycoprotein, immunoglobulins, lipoproteins) measurably reduces free fraction. The differences that decide PK success are sub-twofold and invisible to screens that only bin candidates as pass or fail.

Once a sticky lead enters lead optimization, the cost of catching it later, in pharmacokinetic (PK) studies, in toxicology, in early clinical, can be measured in months and millions. The right place to triage plasma stickiness is at hit-to-lead, before the candidate is committed.

Current methods can't see it in time

Equilibrium dialysis takes 4 to 18 hours per sample and gives only equilibrium fraction unbound, no kinetics. SPR and BLI require plasma dilution or depletion to manage non-specific binding, which introduces matrix artifacts and removes the physiological conditions the assay is meant to read. LC-MS readout still demands sample prep and is blind to the off-target carrier identity.

MACS® Matchmaker reads coherent mass density directly. Specific binding stays clean in undiluted human plasma because the chip rejects matrix noise intrinsically. Full kinetics, kon and koff, in approximately one hour, on the same instrument and the same workflow you already use for affinity and effector function.

The Problem & Our Approach

Plasma binding belongs IN your discovery cycle, not after IND.

Stickiness to plasma has to be screened during candidate selection, not after. Conventional methods are too slow, demand too much material, or rely on plasma dilution that introduces matrix artifacts, so plasma binding is typically measured only on a short-list, late, when course corrections are expensive. The Plasma Protein Binding Panel uses the same focal molography surface as the target-binding assay: candidates immobilized via DNA-directed immobilization (DDI), a single conjugation chemistry, and the same single-cycle kinetics protocol. The panel drops into the same pipeline, the same buffer, the same sample volume, the same instrument.

Off-instrument dialysis to 1-hour on-instrument SCK

Equilibrium dialysis is the textbook reference but takes 4 to 18 hours per sample and gives only equilibrium fraction unbound, no kinetics. MACS® Matchmaker runs the plasma binding panel as a single SCK injection on the same chip you use for target binding, in approximately one hour per candidate.

Plasma dilution to undiluted human plasma

SPR and BLI cannot measure binding in undiluted plasma because matrix non-specific binding overwhelms the signal. MACS® Matchmaker reads coherent mass density directly. Specific binding stays clean even at 100% plasma, so the binding constants reflect physiological conditions.

Single-pair throughput to 64 in parallel

Dialysis processes one sample per well, hours apart. SPR cycles through a small handful per run. MACS® Matchmaker resolves up to 64 candidate-plasma interactions in parallel on a single chip, with within-chip replicates for confidence intervals from a single experiment.

Late-stage triage to every discovery cycle

Off-instrument plasma binding gets measured only on a triaged short-list, after affinity ranking. MACS® Matchmaker lets the plasma panel run on every candidate at every cycle, alongside affinity and effector function, surfacing PK liabilities at the earliest decision point.

Applications in Focus

Where the Plasma Protein Binding Panel delivers value.

The same chip, sample, and protocol address three distinct workflows across antibody discovery and developability.

Discovery
Drop sticky candidates before lead optimization

Run the panel on every candidate alongside the target affinity measurement. Surface plasma stickiness at the earliest selection point, before resources are committed to lead optimization. The plasma binding readout pairs directly with KD in candidate-ranking tables, scoring each candidate on the developability triad: high KD, low Rmax, fast koff.

Lead Optimization
Rank engineered variants on the PK axis

Fc engineering, charge-patch removal, and CDR optimization each shift the plasma interaction profile in unintended directions. The panel ranks engineered variants on the plasma binding axis with the same within-chip statistics as the affinity measurement, in the same experiment.

Developability
Score every candidate before lead-nomination

Build the plasma binding profile into the standard developability data package alongside FcRn, target KD, polyreactivity, and hydrophobic interaction chromatography. The panel returns a calibrated PK-risk score that travels with the candidate into formulation and IND-enabling work.

Two Configurations

One workflow. Two candidate classes.

Biologics Serum Binding, up to 8-plex

The primary configuration for antibody developability. Candidates (antibodies, VHHs, bispecifics, fusion proteins) are DDI-immobilized on the chip; undiluted human plasma flows over them as the analyte. The readout is the bulk serum-interaction KD, koff, and Rmax per candidate, ranked by the developability triad of high KD, low Rmax, fast koff.

Built for the antibody developability workflow at every discovery cycle. Drop sticky leads early without committing material or time to off-instrument PK studies.

Small Molecule Plasma Binding, up to 16-plex

The carrier-protein configuration for medicinal chemistry. Human serum albumin, α1-acid glycoprotein, lipoproteins, and additional plasma carriers are DDI-immobilized as ligands; the drug candidate flows over them as the analyte. The readout is per-protein KD, kinetics, and fraction unbound from the dose-response fit. Down to ~150 Da analyte MW with picomolar sensitivity.

Built for DMPK and medicinal chemistry workflows. Switch between the biologics and small molecule configurations on the same instrument with the same workflow.

Workflow

One injection series. Full kinetics. Approximately one hour.

The chip is loaded once with the pre-conjugated panel via DNA-directed immobilization. Each candidate then runs a single 9-point plasma dilution series (0.39% to 100% undiluted human plasma), with the binding response read simultaneously across all candidates on the chip. The running buffer wash regenerates between samples for routine high-throughput cycles.

One injection series. Full kinetics. Approximately one hour.
Protocol details
  • Total time
    ~1 hour
    single SCK, 9-point plasma dilution series
  • Concentrations
    9 steps, 0.39% to 100% plasma (2-fold)
  • Per step
    180 s association / 600 s final dissociation
  • Readout
    KD, kon, koff, Rmax per candidate

Up to 64 candidates. One hour. One chip.

Run the Plasma Protein Binding Panel on a real candidate. Your candidate. Book a 30-minute discovery call with one of our application scientists.

Key Capabilities

What makes MACS® Matchmaker the purpose-built solution for this workflow.

Up to 64
Multiplexed candidates per chip

Profile a full antibody panel or carrier-protein set on one chip. Within-chip replicates per ligand return mean and confidence interval from a single run, no separate plates and no batched runs.

KD + kinetics
Full kinetics, not just equilibrium

MACS® Matchmaker returns equilibrium KD plus association and dissociation rates from a single plasma SCK. Fast koff separates reversible binding from sequestration. Dialysis returns only equilibrium fraction unbound and cannot make that call.

Single chemistry
Plug-and-play panel

Carrier proteins (HSA, α1-AGP, lipoproteins) and capture adapters (Streptactin-XT, NeutrAvidin, trisNTA) are pre-conjugated and ready-to-use. DDI loading takes one injection, lot-to-lot reproducibility is designed in.

~1 hour
Same chip as target binding

The plasma binding panel runs on the same MACS® Matchmaker chip and the same sample injection used for the target affinity assay. PK liability moves into the discovery cycle instead of running parallel to it.

pg/mm²
Direct mass detection

Coherent mass density at each ligand spot is a direct physical readout of bound mass, not a refractive-index proxy. KD, koff, and Rmax are therefore quantitative numbers rather than relative semi-quantitative scores.

Built-in QC
Reference + replicates

Per-chip Oligo reference and non-binding negative control channels deliver per-injection quality control: absence of signal flags candidate or run failure before any KD is computed. Within-chip replicates per ligand provide confidence intervals from a single experiment.

Method Comparison

MACS® Matchmaker vs. plate-based plasma binding methods.

Equilibrium dialysis and dilution-based SPR/BLI are the established plasma-binding methods. The comparison below addresses the developability-screening workflow specifically.

ParameterMACS® MatchmakerDialysis / SPR / LC-MS
Time per candidate ~1 hour single chip4 to 18 hours per dialysis
Sample consumption μg-scale, shared with target assaymg-scale per dialysis or SPR run
Same workflow as target binding Yes, same chip, same sampleNo, separate instrument and matrix prep
Plasma matrix Undiluted human plasmaDiluted, depleted, or buffer-substituted
Kinetics resolved Full kon, koff, Rmax in one runNone (dialysis), yes (SPR but diluted), none (LC-MS)
Replicates per ligand Up to 8 within-chip replicates per ligandSingle well per condition (dialysis); reference subtraction (SPR)
Quantitative score KD, koff, Rmax per candidateFraction unbound only (dialysis); no carrier identity (LC-MS)
Application Note coming soon

The full panel composition and benchmark dataset is coming soon.

A peer-quality Application Note covering the two-configuration panel design (biologics serum binding + small-molecule carrier panel), the per-ligand rationale, the recommended controls, and a public-reference validation dataset of FDA-approved antibodies profiled in undiluted human plasma is in preparation. Drop us a note to be notified the moment it goes live.

FAQ

Questions we hear most often.

Q.Which plasma types and matrices work?
Human plasma anti-coagulated with EDTA, heparin, or citrate is the default. Serum also works. Cynomolgus and mouse plasma have been validated for cross-species PK bridging; rat and minipig are supported on request. The chip rejects matrix noise intrinsically, so plasma source-of-origin and lot do not need to be controlled the way they do for SPR or BLI.
Q.Do I need to label my candidate?
No. Focal molography is fully label-free. Candidates are immobilized via DNA-directed immobilization (DDI), so they retain native conformation and orientation on the chip. The same is true on the small-molecule configuration: the carrier proteins are DDI-immobilized, the drug analyte flows free.
Q.How much candidate do I need per run?
Microgram quantities per candidate are sufficient. A single 8-plex chip uses roughly 10 to 50 μg per candidate depending on molecular weight, enough for the 9-point plasma dilution series and within-chip replicates. Material consumption is comparable to the target-binding affinity assay run on the same chip.
Q.Can I run small molecules in the same workflow?
Yes. Switch to the small-molecule configuration: immobilize human serum albumin, α1-acid glycoprotein, and additional carrier proteins as ligands, and inject the compound as analyte. The chip is sensitive down to ~150 Da analyte molecular weight at picomolar concentrations, with full kinetics and fraction-unbound output from the dose-response fit.
Q.How does throughput scale?
Unattended on the MACS Sampler 768-well plate automation, the workflow processes roughly 50 to 100 candidates per day for triage, or runs a full developability triage of an antibody panel in a single overnight run. The chip format scales from 4-plex single-candidate runs up to 32-plex deep-developability screens.
Q.What carrier proteins are in the panel?
The default biologics configuration uses undiluted human plasma as the analyte, so all native carrier proteins are present at physiological concentrations on the analyte side. The small-molecule configuration immobilizes human serum albumin and α1-acid glycoprotein as primary ligands, with optional lipoproteins (LDL, HDL), transferrin, fibrinogen, and γ-globulins on extended 8- and 16-plex panels.
Q.Does the readout match equilibrium dialysis fraction unbound?
Yes. The dose-response fit returns KD, from which the equilibrium fraction unbound (fu) is derived directly. For high-affinity binders (KD < 1 μM), values correlate within 2-fold with reference equilibrium dialysis measurements while delivering the additional kon and koff that dialysis cannot resolve.
Q.Does this replace target binding kinetics?
No. The Plasma Protein Binding Panel runs alongside the target binding assay, on the same chip and the same sample injection, as a parallel readout in the same experiment. The panel is the PK / developability axis; the target affinity measurement is the potency axis. Both are needed.