Skip to content

search   cart   my account   contact


Catch fast clearance, aggregation, and immunogenicity before they kill your drug candidate.

The Polyreactivity Panel quantifies non-specific binding across 8 or 16 defined liability axes in a single label-free injection on the same MACS® Matchmaker chip and sample as your target binding kinetics. Score every candidate against the Jain et al. 2017 clinical-stage mAb benchmark.

Book a 30-min demo →

8 or 16
Liability axes per chip
~30 min
Single SCK injection
137 mAbs
Jain clinical-stage benchmark
DDI
Pre-conjugated, ready-to-use
Scientific Background

Polyreactivity is a top developability liability, and it is currently measured off-instrument.

Why polyreactivity drives clinical attrition

Polyreactive antibodies, those that bind structurally unrelated antigens through non-specific surface chemistry, exhibit accelerated serum clearance, elevated immunogenicity risk, self-association, and aggregation. Hötzel and colleagues showed that even modest polyreactivity correlates with poor pharmacokinetics in human subjects, and Jain et al.'s 2017 survey of 137 clinical-stage monoclonal antibodies established that polyreactivity scores correlate with progression through clinical development.

The biophysical liability is set by surface charge patches, hydrophobic residues, and non-specific affinity for membranes, nucleic acids, and abundant plasma proteins. Once a polyreactive lead enters lead optimization, the cost of catching it later, in pharmacokinetic (PK) studies, in toxicology, in early clinical, can be measured in months and millions.

Industry-standard methods are off-instrument and slow

Standard polyreactivity readouts are plate-based: PSR-ELISA on a soluble-membrane preparation, AC-SINS on aggregated antibody, BV-ELISA on baculovirus particles. Each consumes tens of micrograms of candidate per measurement, takes hours per plate, and runs on a different instrument than the target binding assay.

The result is that polyreactivity is measured after affinity ranking is complete, often after a lead candidate has been committed. The MACS® Matchmaker Polyreactivity Panel runs on the same chip and the same sample as your target binding kinetics, with the same fluidics and the same data export, in approximately 30 minutes per candidate.

The Problem & Our Approach

Plate-based polyreactivity assays break the discovery cycle. The panel is built to fit it.

Polyreactivity has to be screened during candidate selection, not after. Conventional methods are too slow and too material-hungry to be run on every candidate at every cycle, so polyreactivity is typically measured only on a short-list, late, when course corrections are expensive. The Polyreactivity Panel uses the same focal molography surface as the target-binding assay: defined ligands immobilized via DNA-directed immobilization (DDI), a single NHS-amine conjugation chemistry, and the same single-cycle kinetics protocol. The polyreactivity readout drops into the same pipeline, the same buffer, the same sample volume, the same instrument.

Off-instrument plate methods → 30-min on-instrument

PSR-ELISA, AC-SINS, and BV-ELISA each take hours per plate and run separately from the target-binding assay. MACS® Matchmaker runs the polyreactivity panel as a single SCK injection on the same chip as the affinity assay, in approximately 30 minutes per candidate.

Material-hungry → micrograms

Plate methods consume tens of micrograms of antibody per candidate per readout. MACS® Matchmaker runs the polyreactivity panel on the same low-volume sample injection used for target binding, freeing material for the kinetic assay and downstream characterization.

Heterogeneous reagents → defined ligands

Soluble-membrane PSR preparations and aggregated antibody preps are heterogeneous and lot-to-lot variable. MACS® Matchmaker uses commercial, recombinant or highly purified ligands plus defined amine-functionalised lipids and glycosaminoglycans, all conjugated through a single NHS chemistry. No aggregates, no membrane preparations, no carrier-protein conjugates.

Late-stage flag → at every discovery cycle

Off-instrument workflows force polyreactivity to be measured only on a triaged short-list. MACS® Matchmaker lets the polyreactivity panel run on every candidate at every cycle, alongside affinity, surfacing developability liabilities at the earliest decision point.

Applications in Focus

Where the Polyreactivity Panel delivers value.

The same chip, sample, and protocol address three distinct workflows across antibody discovery and developability.

Discovery
Drop polyreactive candidates before lead optimization

Run the panel on every candidate alongside the target affinity measurement. Surface polyreactivity at the earliest selection point, before resources are committed to lead optimization. The Polyreactivity Index converts the multi-axis readout into a single quantitative number that can be paired directly with KD in candidate-ranking tables.

Lead Optimization
Rank engineered variants on the developability axis

Fc engineering, charge-patch removal, and CDR optimization can each shift the polyreactivity profile in unintended directions. The panel ranks engineered variants on the polyreactivity axis with the same within-chip statistics as the affinity measurement, in the same experiment.

Developability
Score every candidate before lead-nomination

Build the Polyreactivity Index into the standard developability data package alongside FcRn, target KD, hydrophobic interaction chromatography, and self-interaction. Anchored to the Jain 2017 clinical-stage benchmark distribution, the PI gives a calibrated risk score that travels with the candidate into formulation and IND-enabling work.

Two Configurations

One workflow. Two depths of liability coverage.

Polyreactivity Essentials, 8-plex

The triage configuration. One ligand per major liability axis: Protein A/G as the Fc-capture positive control, dsDNA reference, human serum albumin, insulin, lysozyme, aminocardiolipin, aminoheparin, and polyclonal human IgG. 8 within-chip replicates per ligand for high-confidence statistics from a single experiment.

Built for the routine candidate-triage workflow at every discovery cycle. Drop polyreactive candidates early without consuming the material and the time of a full developability panel.

Polyreactivity Plus, 16-plex

The in-depth configuration. Adds parallel ligands per axis (BSA + HSA, ovalbumin + insulin, ssDNA + dsDNA), the antiphospholipid-syndrome autoantigen β2-glycoprotein I, lipopolysaccharide, transferrin, human IgM, and fibrinogen. 4 within-chip replicates per ligand, with the breadth needed for cross-axis liability mapping.

Built for the developability assessment that supports lead-nomination and IND-enabling work, where the breadth of axes resolves which liability is driving the score and informs targeted engineering.

Workflow

One injection. All axes. Approximately 30 minutes.

The chip is loaded once with the pre-conjugated ligand panel via DNA-directed immobilization. Each candidate then runs a single ascending-concentration injection series in HBS-EP+ pH 7.4, with the polyreactivity response read simultaneously across all 8 or 16 channels. The running buffer wash regenerates between candidates for routine screening; a brief glycine pH 2.0 strip recovers the Protein A/G channel for high-throughput cycles.

One injection. All axes. Approximately 30 minutes.
Protocol details
  • Total time
    ~30 min
    single SCK, 3 ascending concentrations
  • Concentrations
    3 steps, 30 / 100 / 300 nM
  • Per step
    120 s contact / 300 s dissociation
  • Readout
    Polyreactivity Index normalized to Protein A/G

Eight axes or sixteen. Thirty minutes either way.

Run the Polyreactivity Panel on a real candidate. Your candidate. Book a 30-minute demo with one of our application scientists.

Book a demo →Open in shop →

Key Capabilities

What makes MACS® Matchmaker the purpose-built solution for this workflow.

8 or 16 axes
Two configurations for two use cases

Polyreactivity Essentials (8 ligands, one per major liability axis) for routine triage; Polyreactivity Plus (16 ligands, parallel axes plus β2-GPI, LPS, IgM, fibrinogen) for in-depth developability. Both run on the same instrument with the same protocol.

Quantitative PI
Anchored to clinical-stage benchmarks

The Polyreactivity Index is the mean equilibrium response across non-control channels, normalized to the Protein A/G control. Three-tier thresholds (acceptable / orthogonal-confirm / liability) are anchored to the Jain et al. 2017 distribution of 137 clinical-stage monoclonal antibodies.

Single chemistry
NHS-conjugated DDI

All ligands are conjugated through a single NHS amine-reactive chemistry to amine-modified DDI oligos. No aggregates, no soluble-membrane preparations, no carrier-protein hapten conjugates. Lot-to-lot reproducibility designed in.

~30 min
Same chip as target binding

The polyreactivity panel runs on the same MACS® Matchmaker chip and the same sample injection used for the target affinity assay. Polyreactivity moves into the discovery cycle instead of running parallel to it.

pg/mm²
Direct mass detection

Coherent mass density at each ligand spot is a direct physical readout of bound mass, not a refractive-index proxy. The Polyreactivity Index is therefore a quantitative number rather than a relative semi-quantitative score.

Built-in QC
Protein A/G plus replicates

The Protein A/G channel provides a per-injection Fc-capture quality control: absence of signal flags candidate or run failure before any PI is computed. 8 (Essentials) or 4 (Plus) within-chip replicates per ligand provide confidence intervals from a single experiment.

Method Comparison

MACS® Matchmaker vs. plate-based polyreactivity methods.

PSR-ELISA, AC-SINS, and BV-ELISA are the established plate methods. The comparison below addresses the developability-screening workflow specifically.

ParameterMACS® MatchmakerPSR-ELISA / AC-SINS / BV-ELISA
Time per candidate ~30 min single chiphours of plate work
Sample consumption µg-scale, shared with target assay10s of µg per candidate per readout
Same workflow as target binding Yes, same chip, same sampleNo, separate instrument and prep
Liability axes covered 8 or 16, defined ligands1 to 3 per assay (axis-specific)
Reagent definition Recombinant or purified, single NHS chemistrySoluble-membrane preps, aggregated antibody, baculovirus particles
Replicates per ligand 8 (Essentials) / 4 (Plus) within-chipPlate triplicate typical
Quantitative score Polyreactivity Index, pg/mm² readoutSemi-quantitative or relative
Application Note

Get the full panel composition and threshold validation.

A peer-quality application note describing the two-configuration panel design, the per-axis ligand rationale, the Polyreactivity Index calculation, and the threshold anchoring against the Jain 2017 clinical-stage mAb distribution. Includes the trastuzumab / adalimumab low-PI controls and the 4E10 / 2F5 HIV broadly neutralizing antibody high-PI controls used to validate the assay.

Request the AppNote →
FAQ

Questions we hear most often.

Q.What is the Polyreactivity Index (PI)?
The PI is the mean equilibrium response across all non-control ligand channels, normalized to the Protein A/G control on the same chip. Normalization cancels candidate-specific differences in immobilization efficiency and per-injection mass loading, so the PI is comparable across candidates and across runs. Three-tier thresholds (PI < 0.20 acceptable, 0.20 to 0.50 orthogonal-confirm, > 0.50 liability) are anchored to the Jain et al. 2017 distribution of 137 clinical-stage monoclonal antibodies.
Q.Which configuration should I use, Essentials or Plus?
Essentials (8-plex) is built for the routine candidate-triage workflow at every discovery cycle: one ligand per major liability axis, 8 within-chip replicates, fastest readout. Plus (16-plex) is built for in-depth developability assessment near lead-nomination: parallel ligands per axis plus β2-glycoprotein I, lipopolysaccharide, IgM, and fibrinogen. Programs typically run Essentials during discovery and Plus once a short-list of leads emerges.
Q.How does this differ from PSR-ELISA, AC-SINS, and BV-ELISA?
The plate methods are off-instrument, axis-specific, and material-hungry: each measures one or two liability axes per assay, runs separately from the target-binding workflow, and consumes tens of micrograms of antibody per readout. The Polyreactivity Panel measures 8 or 16 axes simultaneously on the same chip and the same sample as the target affinity assay, in approximately 30 minutes. Plate methods remain useful as orthogonal confirmation; they are not a substitute for in-cycle screening.
Q.How were the PI thresholds derived?
The thresholds are calibrated to the Jain et al. 2017 distribution of polyreactivity scores across 137 clinical-stage monoclonal antibodies, which established a quantitative link between polyreactivity and progression through clinical development. The acceptable / orthogonal-confirm / liability tiers are positioned at PI distribution percentiles consistent with the Jain dataset. Final calibration on each program's reference set is recommended.
Q.Does the DNA channel give meaningful data on a DDI surface?
Yes. The DNA reference channels (ssDNA, dsDNA in Plus; dsDNA in Essentials) carry defined sequence and length, distinct from the immobilization linker chemistry of the panel. Anti-DNA reactivity registers as authentic binding to the dedicated DNA reference and is interpretable on the panel-level readout.
Q.Is the panel compatible with IgG2, IgG4, and Fc-fusion proteins?
Yes. The panel is designed around Fc-mediated capture (Protein A/G as positive control) plus non-specific surface chemistry, both of which are conserved across IgG subclasses and most Fc-fusion formats. Bispecific and IgG-fragment formats are supported case by case; contact us to discuss your specific format.
Q.Does the panel work on cell-culture supernatant?
Yes. Cell-culture supernatant performance is supported and is one of the panel's design targets, since the discovery-stage workflow it is built for runs on un-purified candidates. Extension to crude lysate or serum for polyreactivity specifically is currently being characterized internally.
Q.Does this replace target binding kinetics?
No. The Polyreactivity Panel runs alongside the target binding assay, on the same chip and the same sample injection, as a parallel readout in the same experiment. The panel is the developability axis; the target affinity measurement is the potency axis. Both are needed.